Create Project From Sequence File in CARA - Revision history

Agutmana: moved CARA Create Project From Seq to Create Project From Sequence File in CARA

2009-11-09T22:40:50Z

moved CARA Create Project From Seq to Create Project From Sequence File in CARA

← Older revision	Revision as of 22:40, 9 November 2009
(No difference)

Agutmana at 19:52, 6 November 2009

2009-11-06T19:52:16Z

← Older revision		Revision as of 19:52, 6 November 2009
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	It is possible to start a project from scratch. You can also start a project from a BMRB deposition file, for example, downloaded from the BMRB web site.		It is possible to start a project from scratch. You can also start a project from a BMRB deposition file, for example, downloaded from the BMRB web site.

	However, assuming that you are working on a new protein, you will likely need to start from an XEASY sequence file. To do that you will need to right-lick on the Projects tab, select Import Project from Sequence from the context menu and provide a *.seq file.		However, assuming that you are working on a new protein, you will likely need to start from an [[XEASY]] sequence file. To do that you will need to right-lick on the '''Projects''' tab, select '''Import Project from Sequence '''from the context menu and provide a *.seq file.

	I will have to confirm that the sequence file represents residues, not abstract spin systems, as expected for a "true" sequence.		I will have to confirm that the sequence file represents residues, not abstract spin systems, as expected for a "true" sequence.

Agutmana at 19:51, 6 November 2009

2009-11-06T19:51:28Z

← Older revision		Revision as of 19:51, 6 November 2009
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	*Create a project from sequence file:<br>      [[Image:~~CARA_proj_import_from_seq~~.~~png‎~~]]		*Create a project from sequence file:<br>      [[Image:CARA proj import from seq.png]]

	This will create a project entry with the same name as the *.seq file, with the sequence field appropriately filled and all other fields empty. You can also rename a project at any time.		This will create a project entry with the same name as the *.seq file, with the sequence field appropriately filled and all other fields empty. You can also rename a project at any time.
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	*Created project:<br>      [[Image:CARA ~~New~~ project.png]]		*Created project:<br>      [[Image:CARA new project.png]]

	In principle, a repository can contain several projects. However, many common Lua scripts assume that there is a single project in a repository. Therefore, creating several projects in a single repository is not encouraged.		In principle, a repository can contain several projects. However, many common Lua scripts assume that there is a single project in a repository. Therefore, creating several projects in a single repository is not encouraged.

Agutmana at 19:50, 6 November 2009

2009-11-06T19:50:04Z

← Older revision		Revision as of 19:50, 6 November 2009
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	*Create a project from sequence file:<br>      [[~~File~~:~~CARA_Proj_import_from_seq~~.~~png~~]]		*Create a project from sequence file:<br>      [[Image:CARA_proj_import_from_seq.png‎]]

	This will create a project entry with the same name as the *.seq file, with the sequence field appropriately filled and all other fields empty. You can also rename a project at any time.		This will create a project entry with the same name as the *.seq file, with the sequence field appropriately filled and all other fields empty. You can also rename a project at any time.
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	*Created project:<br>      [[Image:~~CARA_New_project~~.png]]		*Created project:<br>      [[Image:CARA New project.png]]

	In principle, a repository can contain several projects. However, many common Lua scripts assume that there is a single project in a repository. Therefore, creating several projects in a single repository is not encouraged.		In principle, a repository can contain several projects. However, many common Lua scripts assume that there is a single project in a repository. Therefore, creating several projects in a single repository is not encouraged.

Agutmana at 19:49, 6 November 2009

2009-11-06T19:49:14Z

← Older revision		Revision as of 19:49, 6 November 2009
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	*Create a project from sequence file:<br>      [[~~Image~~:~~CARA Proj import from seq~~.png]]		*Create a project from sequence file:<br>      [[File:CARA_Proj_import_from_seq.png]]

	This will create a project entry with the same name as the *.seq file, with the sequence field appropriately filled and all other fields empty. You can also rename a project at any time.		This will create a project entry with the same name as the *.seq file, with the sequence field appropriately filled and all other fields empty. You can also rename a project at any time.
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	*Created project:<br>      [[Image:~~CARA New project~~.png]]		*Created project:<br>      [[Image:CARA_New_project.png]]

	In principle, a repository can contain several projects. However, many common Lua scripts assume that there is a single project in a repository. Therefore, creating several projects in a single repository is not encouraged.		In principle, a repository can contain several projects. However, many common Lua scripts assume that there is a single project in a repository. Therefore, creating several projects in a single repository is not encouraged.

Agutmana at 19:48, 6 November 2009

2009-11-06T19:48:37Z

← Older revision		Revision as of 19:48, 6 November 2009
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	*Create a project from sequence file:<br>      [[~~File~~:~~proj_import_from_seq~~.png]]		*Create a project from sequence file:<br>      [[Image:CARA Proj import from seq.png]]

	This will create a project entry with the same name as the *.seq file, with the sequence field appropriately filled and all other fields empty. You can also rename a project at any time.		This will create a project entry with the same name as the *.seq file, with the sequence field appropriately filled and all other fields empty. You can also rename a project at any time.
Line 15:		Line 15:


	*Created project:<br>      [[~~File~~:~~new_project~~.png]]		*Created project:<br>      [[Image:CARA New project.png]]

	In principle, a repository can contain several projects. However, many common Lua scripts assume that there is a single project in a repository. Therefore, creating several projects in a single repository is not encouraged.		In principle, a repository can contain several projects. However, many common Lua scripts assume that there is a single project in a repository. Therefore, creating several projects in a single repository is not encouraged.

Agutmana at 19:48, 6 November 2009

2009-11-06T19:48:07Z

← Older revision		Revision as of 19:48, 6 November 2009
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	Starting a New Project		Starting a New Project

	It is possible to start a project from scratch. You can also start a project from a BMRB deposition file, for example, downloaded from the BMRB web site.		It is possible to start a project from scratch. You can also start a project from a BMRB deposition file, for example, downloaded from the BMRB web site.

	However, assuming that you are working on a new protein, you will likely need to start from an XEASY sequence file. To do that you will need to right-lick on the Projects tab, select Import Project from Sequence from the context menu and provide a *.seq file.		However, assuming that you are working on a new protein, you will likely need to start from an XEASY sequence file. To do that you will need to right-lick on the Projects tab, select Import Project from Sequence from the context menu and provide a *.seq file.

	I will have to confirm that the sequence file represents residues, not abstract spin systems, as expected for a "true" sequence.		I will have to confirm that the sequence file represents residues, not abstract spin systems, as expected for a "true" sequence.


	*Create a project from sequence file:<br>      proj_import_from_seq.png

	This will create a project entry with the same name as the *.seq file, with the sequence field appropriately filled and all other fields empty. You can also rename a project at any time.		*Create a project from sequence file:<br>      [[File:proj_import_from_seq.png]]

			This will create a project entry with the same name as the *.seq file, with the sequence field appropriately filled and all other fields empty. You can also rename a project at any time.


	*Created project:<br>      new_project.png

	In principle, a repository can contain several projects. However, many common Lua scripts assume that there is a single project in a repository. Therefore, creating several projects in a single repository is not encouraged.		*Created project:<br>      [[File:new_project.png]]

			In principle, a repository can contain several projects. However, many common Lua scripts assume that there is a single project in a repository. Therefore, creating several projects in a single repository is not encouraged.

	See also this page on importing Xeasy *.seq files: [http://www.cara.ethz.ch/Wiki/WorkingWithOtherProgramsImportExport http://www.cara.ethz.ch/Wiki/WorkingWithOtherProgramsImportExport]		See also this page on importing Xeasy *.seq files: [http://www.cara.ethz.ch/Wiki/WorkingWithOtherProgramsImportExport http://www.cara.ethz.ch/Wiki/WorkingWithOtherProgramsImportExport]

	-- Main.AlexEletski - 07 Mar 2007		-- Main.AlexEletski - 07 Mar 2007

Agutmana: Created page with ' Starting a New Project It is possible to start a project from scratch. You can also start a project from a BMRB deposition file, for example, downloaded from the BMRB web …'

2009-11-06T19:46:06Z

Created page with ' Starting a New Project It is possible to start a project from scratch. You can also start a project from a BMRB deposition file, for example, downloaded from the BMRB web …'

New page

 Starting a New Project

It is possible to start a project from scratch. You can also start a project from a BMRB deposition file, for example, downloaded from the BMRB web site.

However, assuming that you are working on a new protein, you will likely need to start from an XEASY sequence file. To do that you will need to right-lick on the Projects tab, select Import Project from Sequence from the context menu and provide a *.seq file.

I will have to confirm that the sequence file represents residues, not abstract spin systems, as expected for a "true" sequence.

   
*Create a project from sequence file:<br>      proj_import_from_seq.png

This will create a project entry with the same name as the *.seq file, with the sequence field appropriately filled and all other fields empty. You can also rename a project at any time.

   
*Created project:<br>      new_project.png

In principle, a repository can contain several projects. However, many common Lua scripts assume that there is a single project in a repository. Therefore, creating several projects in a single repository is not encouraged.

See also this page on importing Xeasy *.seq files: [http://www.cara.ethz.ch/Wiki/WorkingWithOtherProgramsImportExport http://www.cara.ethz.ch/Wiki/WorkingWithOtherProgramsImportExport]

-- Main.AlexEletski - 07 Mar 2007