Common NMR experiment sets: Difference between revisions
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(Created page with '== Szyperski group == The following experiments are recorded for NC samples Common experiments *1D *1D 15N T1 *1D 15N T2 *2D [15N,1H]-HSQC *2D [15N,1H]-HSQC with wide spectral…') |
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== Szyperski group == | == Szyperski group == | ||
The following experiments are recorded for NC samples | The following experiments are recorded for NC samples | ||
Common experiments | {| cellspacing="0" cellpadding="0" | ||
|- | |||
*1D | ! Common experiments | ||
*1D 15N T1 | ! GFT protocol | ||
*1D 15N T2 | ! Conventional protocol | ||
*2D [15N,1H]-HSQC | ! Fractionally 13C-labeled samples | ||
*2D [15N,1H]-HSQC with wide spectral width in 15N (optional)<br> | |- valign="top" | ||
*2D [13C,1H]-HSQC aliphatic<br> | | | ||
*2D [13C,1H]-HSQC aromatic (optional)<br> | *1D | ||
*2D [13C,1H]-CT-HSQC aliphatic | *1D 15N T1 | ||
*2D [13C,1H]-CT-HSQC aromatic | *1D 15N T2 | ||
*2D long-range [15N,1H]-HSQC or HMQC for histidine rings (optional)<br> | *2D [15N,1H]-HSQC | ||
*3D HN(CA)CO (optional) | *2D [15N,1H]-HSQC with wide spectral width in 15N (optional)<br> | ||
*3D (H)CCH-TOCSY | *2D [13C,1H]-HSQC aliphatic<br> | ||
*2D HE(CECDCG)CB (optional) | *2D [13C,1H]-HSQC aromatic (optional)<br> | ||
*2D [13C,1H]-CT-HSQC aliphatic | |||
*2D [13C,1H]-CT-HSQC aromatic | |||
*2D long-range [15N,1H]-HSQC or HMQC for histidine rings (optional)<br> | |||
*3D HN(CA)CO (optional) | |||
*3D (H)CCH-TOCSY | |||
*2D HE(CECDCG)CB (optional) | |||
*3D 15N/13Cali/13Caro-resolved [1H,1H]-NOESY | *3D 15N/13Cali/13Caro-resolved [1H,1H]-NOESY | ||
| | |||
*(3,2)D GFT HN<u>NCO</u> or 3D HNCO<br> | |||
*(4,3)D GFT <u>CABCA</u>(CO)NH<br> | |||
*(4,3)D GFT HN<u>CABCA</u><br> | |||
*(4,3)D <u>GFT HABCAB</u>(CO)NH<br> | |||
*(4,3)D <u>GFT HC</u>CH aliphatic<br> | |||
*(4,3)D <u>GFT HC</u>CH-COSY aromatic | |||
| | |||
*3D HNCO | |||
*3D HN(CA)CO | |||
*3D CBCA(CO)NH | |||
*3D HNCACB | |||
*3D HBHA(CO)NH | |||
*(H)CCH-COSY aliphatic | |||
*(H)CCH-COSY aromatic | |||
| | |||
*2D [13C,1H]-CT-HSQC, 28ms delay - optimized for methyl groups<br> | |||
* | *2D [13C,1H]-CT-HSQC, 56ms delay (optional)<br> | ||
* | *2D [13C,1H]-CT-HSQC, 42ms delay (optional) | ||
* | *2D long-range [15N,1H]-HSQC or HMQC for histidine rings (optional - can also be run for the NC sample)<br> | ||
|} | |||
*( | |||
== Arrowsmith group == | |||
Data acquisition is taylored for [[Abacus|ABACUS]] approach for resonance assignment. Most 3D spectra are collected with [[Setting up non-uniformly sampled spectra|Non-uniform sampling]] and processed with [[Processing non-uniformly sampled spectra with Multidimensional Decomposition|Multidimensional decomposition]], | |||
<br> | |||
{| cellspacing="0" cellpadding="0" | |||
*3D | |- | ||
*3D | ! NH-rooted | ||
! CH-rooted (aliphatic) | |||
*3D HBHA(CO)NH | ! CH-rooted (aromatic) | ||
*( | ! Other | ||
*( | |- valign="top" | ||
| | |||
*2D [15N,1H]-HSQC | |||
*3D 15N-NOESY-HSQC | |||
*3D HNCO | |||
*3D HNCA | |||
*3D CBCA(CO)NH | |||
*3D HBHA(CO)NH | |||
*3D C(CCO)NH-TOCSY (optional) | |||
*3D H(CCCO)NH-TOCSY (optional) | |||
| | |||
*2D [13C,1H]-HSQC | |||
*2D [13C,1H]-CT-HSQC | |||
*3D 13C-NOESY-HSQC | |||
*3D (H)CCH-TOCSY | |||
*3D H(C)CH-TOCSY | |||
| | |||
*2D [13C,1H]-HSQC | |||
*2D [13C,1H]-CT-HSQC (optional) | |||
*3D 13C-NOESY-HSQC | |||
*3D (H)CCH-TOCSY (optional) | |||
*3D H(C)CH-TOCSY (optional) | |||
| | |||
*1D presaturation | |||
*1D 15N T1 | |||
*1D 15N T2 | |||
*2D long-range [15N,1H]-HSQC or HMQC for histidine rings (optional) | |||
*2D HE(CECDCG)CB (optional) | |||
*2D HD(CDCG)CB (optional) | |||
|} | |||
Latest revision as of 11:07, 8 January 2010
Szyperski group
The following experiments are recorded for NC samples
Common experiments | GFT protocol | Conventional protocol | Fractionally 13C-labeled samples |
---|---|---|---|
|
|
|
|
Arrowsmith group
Data acquisition is taylored for ABACUS approach for resonance assignment. Most 3D spectra are collected with Non-uniform sampling and processed with Multidimensional decomposition,
NH-rooted | CH-rooted (aliphatic) | CH-rooted (aromatic) | Other |
---|---|---|---|
|
|
|
|