Common NMR experiment sets: Difference between revisions
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== Arrowsmith group == | == Arrowsmith group == | ||
Data acquisition is taylored for [[Abacus|ABACUS]] approach for resonance assignment. Most 3D spectra collected with [[Setting up non-uniformly sampled spectra|Non-uniform sampling]] and processed with [[Processing non-uniformly sampled spectra with Multidimensional Decomposition|Multidimensional decomposition]], | Data acquisition is taylored for [[Abacus|ABACUS]] approach for resonance assignment. Most 3D spectra are collected with [[Setting up non-uniformly sampled spectra|Non-uniform sampling]] and processed with [[Processing non-uniformly sampled spectra with Multidimensional Decomposition|Multidimensional decomposition]], | ||
*1D presaturation | *1D presaturation | ||
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*2D HE(CECDCG)CB (optional) | *2D HE(CECDCG)CB (optional) | ||
{| | {|align="top" | ||
!NH-rooted | |- | ||
|- | ! NH-rooted | ||
! CH-rooted | |||
! Aromatic | |||
|- | |||
| | | | ||
*3D 15N-NOESY-HSQC | *3D 15N-NOESY-HSQC | ||
| Line 77: | Line 80: | ||
*3D HNCA | *3D HNCA | ||
*3D CBCA(CO)NH | *3D CBCA(CO)NH | ||
*3D HBHA(CO)NH | *3D HBHA(CO)NH | ||
*3D C(CCO)NH-TOCSY (optional) | *3D C(CCO)NH-TOCSY (optional) | ||
*3D H(CCCO)NH-TOCSY (optional) | *3D H(CCCO)NH-TOCSY (optional) | ||
| | | | ||
*3D (H)CCH-TOCSY | *3D (H)CCH-TOCSY | ||
*3D H(C)CH-TOCSY | *3D H(C)CH-TOCSY | ||
*3D 13C-NOESY-HSQC | *3D 13C-NOESY-HSQC | ||
| | | | ||
*3D (H)CCH-TOCSY (optional) | *3D (H)CCH-TOCSY (optional) | ||
*3D H(C)CH-TOCSY (optional) | *3D H(C)CH-TOCSY (optional) | ||
*3D 13C-NOESY-HSQC | *3D 13C-NOESY-HSQC | ||
|} | |} | ||
Revision as of 21:43, 23 December 2009
Szyperski group
The following experiments are recorded for NC samples
Common experiments
- 1D
- 1D 15N T1
- 1D 15N T2
- 2D [15N,1H]-HSQC
- 2D [15N,1H]-HSQC with wide spectral width in 15N (optional)
- 2D [13C,1H]-HSQC aliphatic
- 2D [13C,1H]-HSQC aromatic (optional)
- 2D [13C,1H]-CT-HSQC aliphatic
- 2D [13C,1H]-CT-HSQC aromatic
- 2D long-range [15N,1H]-HSQC or HMQC for histidine rings (optional)
- 3D HN(CA)CO (optional)
- 3D (H)CCH-TOCSY
- 2D HE(CECDCG)CB (optional)
- 3D 15N/13Cali/13Caro-resolved [1H,1H]-NOESY
GFT protocol
- (3,2)D GFT HNNCO or 3D HNCO
- (4,3)D GFT CABCA(CO)NH
- (4,3)D GFT HNCABCA
- (4,3)D GFT HABCAB(CO)NH
- (4,3)D GFT HCCH aliphatic
- (4,3)D GFT HCCH-COSY aromatic
Conventional protocol
- 3D HNCO
- 3D HN(CA)CO
- 3D CBCA(CO)NH
- 3D HNCACB
- 3D HBHA(CO)NH
- (H)CCH-COSY aliphatic
- (H)CCH-COSY aromatic
Fractionally 13C-labeled samples
- 2D [13C,1H]-CT-HSQC, 28ms delay - optimized for methyl groups
- 2D [13C,1H]-CT-HSQC, 56ms delay (optional)
- 2D [13C,1H]-CT-HSQC, 42ms delay (optional)
- 2D long-range [15N,1H]-HSQC or HMQC for histidine rings (optional - can also be run for the NC sample)
Arrowsmith group
Data acquisition is taylored for ABACUS approach for resonance assignment. Most 3D spectra are collected with Non-uniform sampling and processed with Multidimensional decomposition,
- 1D presaturation
- 1D 15N T1
- 1D 15N T2
- 2D [15N,1H]-HSQC
- 2D [13C,1H]-HSQC aliphatic
- 2D [13C,1H]-HSQC aromatic
- 2D [13C,1H]-CT-HSQC aliphatic
- 2D [13C,1H]-CT-HSQC aromatic (optional)
- 2D long-range [15N,1H]-HSQC or HMQC for histidine rings (optional)
- 2D HE(CECDCG)CB (optional)
| NH-rooted | CH-rooted | Aromatic |
|---|---|---|
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