Resonance Assignment/Abacus/Protein Sequence format

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A1. Fasta format.

The first line shoul start with '>' symbol.

Next one or more lines contain sequence in 1-letter code.




Example_A1:

> MDSKEVLVHVKNLEKNKSNDAAVLEILHVL DKEFVPTE KLLRETKVGVE VNKFKKSTN VEISKLVKKMISSWKDAIN





A2. "Standard" format.

Each line contains name of one residue in 3-lettr code and, optionally, the residue ID.

(only residue ID of the first residue is used to start numbering of the sequence positions).




Example_A2.1 (position ID is not specified)

GLN GLY HIS MET PRO GLY ILE ILE TYR GLU GLY LYS GLY THR ASN MET GLU ....

Example_A2.2 (with specified all position ID):

GLN -3 GLY -2 HIS -1 MET 0 PRO 1 GLY 2 ILE 3 ILE 4 TYR 5 .....

Example_A2.3 (with specified first position ID):

GLN -3 GLY HIS MET PRO GLY ILE ILE TYR .....