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Resonance Assignment/Abacus/Protein Sequence format
...contains name of one residue in 3-letter code and, optionally, the residue ID. (Only residue ID of the first residue is used to start [[FMCGUI objects#Protein_sequence|num

916 bytes (132 words) - 23:34, 5 January 2010
A. Protein Sequence
...contains name of one residue in 3-lettr code and, optionally, the residue ID. (only residue ID of the first residue is used to start numbering of the sequence positions).

3 KB (438 words) - 23:49, 25 November 2009
Resonance Assignment/Abacus/FMCGUI objects
...aded sequence should be numbered accordingly with a negative position ID for the first residue.</div><div> </div> ==== User ID       ====

9 KB (1,416 words) - 00:23, 9 January 2010
HarvestDB
...p;  g. HarvestDB setups NMR id, construct id, batch id from input PST id<br>             h. Users ...sp;           b. HarvestDB sends Target id, Protein is, Coordinates, Constraint Lists to PSVS<br>    &n

11 KB (1,736 words) - 19:43, 22 September 2010
ADIT-NMR
...BMRB deposition.  The user is immediately e-mailed a restart session ID, which allows the user to log out and restart a session at a later time.&nb ...e entry is deposited, the user will immediately receive a PDB or BMRB ID number.

4 KB (567 words) - 16:59, 5 January 2010
Resonance Assignment/Abacus/Spin systems format
...if it is not known). </div><div> </div><div> The fragments user ID could be any digit number < 500. There is no restriction on the order of ...ze="2">Example</font>''<font size="2">2.1. Assigned AA-fragments with user ID specified.</font></div><div><font size="2">  </font></div><pre>..

13 KB (1,908 words) - 23:35, 5 January 2010
PDB and BMRB Deposition
*<span id="1257278398860S" style="display: none;"> </span><tt>init.cya</tt> *Stereospecific assignment file (e.g. <tt>finalstereo.cya</tt>) <br> <span id="1257278398974E" style="display: none;"> </span><br> Make sure you hav

15 KB (2,295 words) - 16:09, 22 September 2010
SPINS
...me domain NMR data for a structure project to BMRB under a given BMRB ID. ...rting NMR pulse sequences, and a project manage.   Clicking the "help" link provides a complete manual in pdf format.

2 KB (274 words) - 16:58, 5 January 2010
Alignment Media Preparation
:'''Wilmad P-4.4965M-6.5135-0-0''', 4.4965mm +/-0.0065mm ID x 6.5135mm +/-0.0065mm. Ground polished and buffed OD. 40mm +/- 0.5mm long. | 2.8 mm ID  plastic

11 KB (1,713 words) - 20:32, 18 December 2013
Cofactor optimization
In this example (NESG ID IscU) the effect of metal chelation on protein stability was probed by a 2D <br> ''E.coli ''YhhK (NESG ID ET106) is a putative GCN5-related N-acetyltransferase (NAT) whose substrate

5 KB (778 words) - 15:22, 17 December 2009
Resonance Assignment/Abacus/Sequence specific assignment of PB fragments
...indow has 3 sections. Top section allows you to select a fragment (by user ID) and modify its typing probabilities. The middle section shows typing proba ...up ‘Fragment Property Modification’ window. You can change the assignment ID of any selected fragment using the bottom section of the window. </div><div

8 KB (1,219 words) - 23:48, 5 January 2010
Resonance Assignment/Abacus/FMCGUI commands
...sp; to a negative number such that the first residue of a protein has ID of 1. </div><div> </div> #<span>   In the order of fragments [[FMCGUI objects#User_ID|user ID]]</span>

69 KB (11,449 words) - 23:33, 5 January 2010
NOE Calibration Using CYANA
Type <tt>help calibrate</tt> at CYANA prompt for more information or see the DYANA docume {| rules="rows" cellspacing="0" cellpadding="0" border="1" class="twikiTable" id="table1" style="width: 638px; height: 76px;"

19 KB (2,656 words) - 21:53, 6 January 2010
Structure Refinement Using XPLOR-NIH
#Have chain A or no chain ID to match your input PDB file. ....psf file atom names do not match the input pdb file names.  This can help you track them down.<br>

4 KB (712 words) - 19:32, 30 November 2009
CARA vs Xeasy
...concise list of key features of CARA as compared to [[XEASY]] that should help new users make a transition. ...l shift (typically different from that of spin itself), and a tag with the ID of the spectrum, where this alias was set. Spin aliases have a purely cosme

6 KB (981 words) - 21:54, 16 November 2017
Resonance Assignment/Abacus/Peak Lists format
...referencing, if present, has format F#, were # is user defined PB-fragment ID. 

15 KB (2,061 words) - 23:35, 5 January 2010
TALOS
...XXX.seq</tt> and <tt>XXXX.prot</tt>, where <tt>XXXX</tt> is an NESG target ID or other protein name. When using CARA, export the chemical shifts as an at

7 KB (1,122 words) - 19:33, 9 January 2014
HNCACAB/CABCA(CO)NH
...>makeAutoList</tt> script again, until all errors are eliminated. The peak ID of the simulated [[AutoAssign]] input file ('''myprot-hsqc.pks''') correspo

10 KB (1,722 words) - 21:29, 30 November 2009
Structure Calculation Using CS-Rosetta
<pre> name:=XXXX # Replace XXXX with NESG ID

9 KB (1,375 words) - 12:43, 14 June 2012
CYANA
<pre>name:=XXXX # Replace XXXX with NESG ID Replace XXXX with your NESG target ID. It is convenient to have the sequence and atomlist files named as <tt>XXXX

23 KB (3,280 words) - 22:55, 1 February 2013

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